4 July 2024

University of Amsterdam

Only through AI and machine learning can we come to grips with all chemicals around us

The open-access Journal of the American Chemical Society (JACS Au) has just published an invited perspective by Dr. Saer Samanipour and his team on the daunting challenge of mapping all the chemicals around us. Samanipour, an Assistant Professor at the Van ‘t Hoff Institute for Molecular Sciences of the University of Amsterdam (UvA), takes inventory of the available science and concludes that currently a real pro-active chemical management is not feasible. To really get a grip on the vast and expanding chemical universe, Samanipour advocates the use of machine learning and AI, complementing existing strategies for detecting and identifying all molecules we are exposed to.

In scientific terminology, the aggregate of all the molecules we are exposed to is called the ‘exposome chemical space’, and it is central to Samanipour’s scientific endeavours. He aims to explore this vast molecular space driven by curiosity and necessity, as direct and indirect exposure to countless, often unknown chemicals poses a significant threat to human health. Estimates indicate that 16% of global premature deaths are linked to pollution, and the environment also suffers, evident in the loss of biodiversity.

The current approach is inherently passive and reactive. Society tends to analyze chemicals only after observing exposure effects. This has led to numerous problems, including the recent PFAS chemicals crisis. Additionally, regulatory measures primarily target chemicals with specific molecular structures produced in large quantities, leaving countless other chemicals largely unexamined. These include both naturally occurring chemicals and those resulting from the transformation of man-made substances.

Conventional chemical analysis is biased toward known or proposed structures, which is crucial for interpreting data from methods like chromatography and mass spectrometry. This bias leads to the oversight of more ‘unexpected’ chemicals. While non-targeted analysis (NTA) avoids this bias, its results are still limited. Over the past five years, 1600 chemicals have been identified, but approximately 700 new chemicals are introduced into the US market alone each year.

To tackle these challenges, Samanipour advocates the use of machine learning and artificial intelligence. He calls for a data-driven approach: intensifying data mining, performing retrospective analyses on already available data, and using AI to understand the structure and scope of the exposome chemical space.

Bron: UvA.nl

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